Results
… the Plant Program is advancing research into plant-microbiome interactions, focusing on how environmental … are available to the community. … EcoFABs link genome biology to ecosystem processes through model laboratory … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
Learn more
The Synthetic Biology lab is divided into a DNA synthesis production group … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … and understanding the design principles for successfully engineering pathways to function in heterologous hosts, by …
Learn more
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … genomics data types as well as in advanced assembly and engineering strategies for DNA synthesis applications. If …
Learn more
Software engineers in the Synthetic Biology Informatics Group … Yeast recombination and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s …
Learn more
Biology is currently experiencing a revolution brought on by … data science. Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
Learn more
… and bioproduct applications. The team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project design, assembly, and quality control Strain Engineering Group : a research & development group and …
Learn more
DOE science mission areas of bioenergy and environmental microbiome processes. Among the JGI’s largest dedicated … (IGB), a home it shares with the staff of the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome … of genome biology and develop the genome-scale engineering technologies needed to design, build, and …
Learn more
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding … around the world. … Integrated Microbial Genomes and Microbiomes … Integrated Microbial Genomes — Plasmid …
Learn more
… environmental challenges. Through innovative research in synthetic biology, the program enables the design and … enzymes to support mission-driven research. Rapid Metabolic Engineering: Metabolic engineering traditionally utilizes a … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …
Learn more
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … of high performance plants and microbes, and understanding microbiome interactions. The insights derived are crucial … microcosms can be designed and studied in EcoFABs as a synthetic microbiome. Here, a controlled environment of …
Learn more
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements …
Learn more
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and skills … public datasets. … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, …
Learn more