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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … drives sustainable solutions in energy, agriculture and ecosystem management. … The Microbial Program focuses on using advanced sequencing technologies to explore microbial … Diversification of the microbial product catalog : Beyond minimal draft and …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure … recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … exploration, granting access to diverse datasets that deepen our understanding of how organisms interact with each … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … to a better understanding of microbial communities and ecosystem function.  The Environmental Genomics group also …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … Plant microbiomes hold the amazing ability to influence plant development, fitness and …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of … bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning …
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Publications
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of … Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … While an ever-increasing number of phage and virus genomes have been …
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