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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and … three domains of life. It provides tools for analyzing the functional capability of microbial communities based on …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

The IMG group owns and maintains integral components of JGI’s production workflow, … and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research …

… by bacterial or fungal metabolism by microbes, will have a functional role. We started from that. Evolution doesn’t … UGA-Langebio in Irapuato, Mexico. His interests are in microbial diversity and evolution, particularly as how … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better …

… exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … with gene expression, providing deeper insights into functional genomics. A key focus is understanding the … demystify the complexity of dissolved organic matter (DOM) across a variety of environments. ENVnet allows us to …

… solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing … genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …