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Publication Policy
… JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … the authorship list based on the contributor list provided by JGI. …
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Publications
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, … and environmental solutions, fostering a bioeconomy powered by nature’s resources. …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The …
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Busting the Unbreakable Lignin
… down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, are the primary … to any type of lignin breakdown — and lignin breakdown by anaerobic fungi therefore thought to be impossible.  And … helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and …
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Lignin deconstruction by anaerobic fungi
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Natural Prodcast Episode 23: Aaron Puri
… introduction in natural products, so I might just start out by asking you know how did you get started. I know you’re … that as a readout of activity. And I was really fascinated by that. And really more generally from undergrad the … about methane gas. And oftentimes people’s mind go right to anaerobic ecosystems. But these are actually– so methane– …
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Special Initiatives & Programs
… negotiation with the JGI.  Investigators with grants funded by DOE-BER requiring support from the JGI may  submit … initiative that seeks to reduce U.S. gasoline consumption by 20% within 10 years through increased efficiency and … also study ways to develop valuable byproducts from lignin left over after biomass processing. Great Lakes …
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Homepage
… National Program for Antarctic Researches (PNRA),  funded by the Italian Ministry of University and Research; all specimens collected and fungi isolated are preserved in the Culture Collection of Fungi from Extreme Environment, the Italian National …
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Secondary Metabolites Program
… the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not … underexplored reservoir of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are key to … of BGCs are expressed under standard laboratory conditions by their native hosts. We are developing cell-free based …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… to the user. Most users of the Molecular Foundry work side-by-side with our scientists at Berkeley Lab. Access to the … basic lab supplies, office supplies) is supported by the Foundry. If a user’s project requires consumables … For projects involving computational work with Dr. Blaby-Haas to model, predict, and understand nanoscale …
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Examples: Successful LOIs & Submissions
… Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway edited populus …
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