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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Genomes & Microbiomes system ( IMG/M ) supports the annotation, comparative analysis, and distribution of …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … Metabolomics Program in …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, cloned into … short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … from isolates and single cells. This effort uncovers novel genes, protein families, and pathways, enhancing our …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI …

Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … public. Things that you do to BGCs– you can add your own annotations and do things to the data — That all becomes … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … work. And that it involves some of these crazy genes, some of these enormous genes that encode these very … For sure. I mean, that goes all the way back to NCBI, gene annotations and ontologies and things that — things have …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and … serves as a community resource for comparative analysis and annotation of all publicly available genomes from three …

… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … our computational tools to really build out much more of an integrative genomics approach to studying environments, … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …