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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … The program provides high-quality, large-scale genomic data to advance microbial research that drives … Novel approaches are being explored to predict microbial lifestyles using AI-driven analysis of such datasets. The …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … in most cases. FRANCISCO BARONA-GOMEZ: In that particular lifestyle. DAN UDWARY: In that particular lifestyle. So … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

The User Support Analysis group provides computational analysis for new … focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of … ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group also performs ‘proof-of …

… and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … and biogeochemistry. This research helps translate their genomic potential into practical applications, including … cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. …

… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing metagenomics … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … would have really done a somewhat exhaustive chemical analysis of a bacterium that they’re interested in, usually …