Search

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not …

… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA synthesis and assembly … technologies including PacBio and Illumina.  The synthetic biology user science group: The applications group is focus …

… EMSL and the Protein Data Bank enables predictive ecosystem biology. The collaborations present exciting possibilities … and other tools. By bringing users together through our systems, we build far-reaching communities of researchers to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: … tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process automation …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … that could advance our understanding of Earth’s ecosystems. …

… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data …

… for a long time about the evolution and natural products systems. This conversation came about because he challenged … ActDES, which is a curated database of actinobacteria for evolutionary studies, and hopefully we can catch him again … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature …

… collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data … access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. … Building (IGB), a home it shares with the staff of the DOE Systems Biology Knowledgebase (KBase), National Microbiome …

… in studies of complex biological and environmental systems. We optimize our service to the community through … Biological systems hold extraordinary potential to power innovation in … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to understand, …