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… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded within those genomes. …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host …

… Research in the Woyke laboratory focuses on the utility of … major branches in the phylogenetic tree without cultivated representatives. The “Great Plate-Count Anomaly” first … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …

… Software engineers in the Synthetic Biology Informatics Group … that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , an … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and …

… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product … performs ‘proof-of principle’ research projects to demonstrate new genomic capabilities. Our group also performs …

… Our lab is using mass spectrometry based metabolite profiling to … metabolism. Of particular interest is understanding the distributed and dynamic metabolite networks of environmental … For further details, please reach out to the Group Lead …