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In particular during an era of ‘homology creep’, function prediction as purely based on annotation may not be … lab is therefore focused on the application of  function-driven single-cell genomics . Here, single cells are … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level … are being explored to predict microbial lifestyles using AI-driven analysis of such datasets. The program also … applications. By expanding our knowledge of microbial functions and interactions, the Microbial Program supports …

By understanding how microbes contribute to ecosystem functions, the Program helps drive innovations that could … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and … metadata, around the world. … NMDC is a community-driven national effort aimed to develop standards, …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic …

We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … We then investigate the coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based … (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the modulation of their … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… we want a chemist to study the ocean. And I didn’t find a single job advertisement. But one day, I decided to really … now. My perception is that a lot of that competition was driven by drug discovery and the money that’s available … I think you’re right. I mean, that too was an issue. What function, what utility, what kind of applications might …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to … sequence to biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: …

… better understanding of microbial communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… of host-virus interactions, the exploration of the functional dark matter as well as the development of novel … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a metagenome-assembled … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …