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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … This includes linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing … tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in the …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … review process, conveys responsibility and accountability Promote utilization of JGI products and services while …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to … microbe-microbe and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on projects …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… advances our understanding of plants’ biological and ecological roles to foster sustainable solutions for energy, … development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …