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… to unlock the fundamental principles that govern ecosystem processes. This research provides insights into microbial … is to develop a deeper understanding of microbial community assembly and microbial interactions, including … microbe-microbe and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of … maximize the impact of user research. The crucial elements are  proposal Award DOI(s), JGI’s ROR ID number, DOE …

… strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

To expand access to integrated data, improve tools and infrastructure as well as … and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and … to systems-level modeling and understanding. JGI and KBase are designated DOE Office of Science Public Reusable …

Plants are complex organisms that harbor a fantastic diversity of … Brachypodium datasets. We recently profiled the association between the plant, Medicago truncatula and an arbuscular … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … sequence to biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: … contact Rekha Seshadri . …       " A lot of our students are working 20, 30, 40 hours a week outside of school . They …

… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental challenges, … This includes linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing … In an effort to gain insights into the interactions between microbial organisms and how these interactions might …

… nutrient cycling and health, terrestrial biogeochemical processes, development of high performance plants and … microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, environmental … genomics. A key focus is understanding the interactions between  plants, microbes, and soils relevant to key …

… is submitted to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the … Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard … reference transcriptome), DGE, alignment files 134/134 Viral Minimal Draft Draft quality viral assembly, many …

… genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …