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Below is a brief description of the process needed to prepare and ship samples for … the importance of proper nucleic acid quantification in our Illumina and PacBio sequencing workflows and provide … form Sample metadata is collected via spreadsheet or directly via a web interface prior to shipping samples to …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … to navigate to the proposal info page. Use a URL Navigate directly to the proposal info page by using the URL …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional … Efforts include developing innovative screening technologies and computational tools that enhance biofuel …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … we utilize single-cell sequencing of micro-eukaryotes directly isolated from environmental samples.  … The IMG/M …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … such as President, Rector, CEO, Sponsored Projects Officer/Director or Legal Representative. Please check with your …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … analysis Text file of SNPs (incl location in genome, coding/vs non, syn vs non-syn aa change etc) and structural rearrangements, alignment files 384/454 Fungal Transcriptome RNA for expression profiling and …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … of complete or near-complete population genomes directly from the environment. These advances have led to …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … 2025 175     2,140     Q4 2025 175     2,167     *Includes Illumina and PacBio sequencing platforms. **Operating Hours … Operating Hours* Goal Actual Total Actual % of Goal 454 Illumina Goal (hours) Actual Total Actual % Goal FY 2011 …

… the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The synthetic biology user science group: The …