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Publication Policy
… The purpose of this policy is to establish communication norms around … recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … microorganisms, by sequencing large populations of bacteria and archaea in their natural environments using …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … And they have the ability to glide underwater at different depths. And they have sensors on them to be able to be in … This is episode 5 of Natural Prodcast, our conversation with Brad Moore, a …
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Publications
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …
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Depth-Differentiation and Seasonality of Planktonic Microbial Assemblages in the Monterey Bay Upwelling System
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI … have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … Looking for BBTools? Find it here.  …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … But other than that, there wasn’t really a whole lot of differentiation by environment. So it seems like you can …
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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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