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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Publications
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Microbiol Resour Announc.  … Objectives … What is IMG/M … Publications … Access to the microbial genomes and …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … them I think. Because E. coli does not have the substrate pool. DAN: The weird precursors, yeah. AARON PURI: So in … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … living there. So we’re looking at how they adapt to these extreme environments. And then can we use that, for example, … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … in cave microbial– people are interested in the more extreme portions of caves where you have to go miles … to the genome mining-based approaches are that other than resistance genes, you have no way of knowing of whether or …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … from isolates and single cells. This effort uncovers novel genes, protein families, and pathways, enhancing our … inferred host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … took a long time for .. I mean, structural elucidation was extremely difficult before the advent of two dimensional NMR … most products have no gene cluster. So either both of those pools have to increase in size dramatically, or there has to …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … our understanding of natural compounds that support disease resistance, with applications in sustainable agriculture, … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a collection of fungal genes …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … their potential applications in the bioeconomy including biofuels, biochemicals and sustainable agriculture. … The …
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