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Strain Engineering
… expression and functional exploration.  The developed strains represent an additional phase of user-accessible project types, in which DNA-based molecules can be chromosomally … For further details, please reach out to the Group Lead …
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Publication Policy
… research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Synthesis
…   The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to … to user project design, assembly, and quality control Strain Engineering Group : a research & development group and … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate …
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DNA Synthesis Program
… bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and … by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. The program has …
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Secondary Metabolites Program
… algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … and their roles in the environment, can unlock new avenues for bio-based products and bioenergy crop enhancement. The … within secondary metabolites, expanding their potential applications in the bioeconomy including biofuels, …
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Natural Prodcast Episode 7: Ben Shen
… were in the news recently – TSRI has acquired the Pfizer strain collection. And so that’s a big collection of natural … origin. Now, if I put this number in reference to the non-natural product, there’s only 30,000 natural products of … biodiversity over the past 80 years! DAN: Maybe! How much variation in that collection do you think there was? BEN: So …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: … members that catalyze data flows and promote novel data applications. As a large-scale data generator, the JGI has a … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance …
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Natural Prodcast Episode 14: Nigel Mouncey
… already had a fermentation process with already engineered strains, but this was to further build on those to try and … that have been described that seemed to work for other types of surfactants. I’m very proud of all the work we did. … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Special Initiatives & Programs
… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … 10 Tbp sequencing, 500 kbp synthesis, and 200 polar/500 nonpolar metabolomics samples, and should generally conform … submit proposals here . Investigators preparing grant applications to DOE-BER and requesting an optional letter of …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural … of single-cell genomes and directly link functional information with individual cells. Research Team    … that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity …
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Natural Prodcast Episode 23: Aaron Puri
… what we’re trying to do right now is develop the chassis strains that then we can port things into as well. DAN: Give … of genes. It was actually originally predicted to be a nonribosomal peptide synthetase but then flanked by these … would envision that microorganisms have evolved multiple variations of these compounds. And so if you’re trying to …
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