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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of the latest … genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other metadata to …

… ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … at the population level. To fully characterize the range of virus-host interactions occurring in microbiomes, … as well as the molecular triggers driving phage infection dynamics. …

… Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell . … H, et al. (2019) Large-Scale Analyses of Human Microbiomes Reveal Thousands of Small, Novel Genes. Cell … 362(6416):839-842. Duerkop BA, et al. (2018) Murine colitis reveals a disease-associated bacteriophage community.  Nat …

… pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … influence plant development, fitness and health. This is a dynamic and complex ecosystem that includes bacteria, fungi, … Selected Publications …

… Schmidt, from the University of Utah. I’ve known Eric for a long time – we worked together on Aflatoxin biosynthesis … pathways to each other. And so, that kind of group dynamic has changed this from a field where everyone’s … is really helpful because you’ve got experts in designing promoters and so on that we can consult in designing pieces …

… of relationships between microbes and their hosts. Our work reveals how these interactions shape ecosystem function, … vast number of microbes on Earth. This ongoing census helps reveal new lineages and functional capabilities in the … A complete publication list available at Google Scholar. Dutkiewicz, Z. …

… a cluster of genes, why can’t you just engineer you know, a promoter or an enhancer, an activator, to go ahead and, and synthesize … don’t really know a whole lot about. So, understanding the dynamics of this system is complex. So, one of the great …

… and I hope you will be too. If this episode went a little long, it’s definitely because we like talking about our … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … tried this method, or I tried this knock-on. I tried these promoters to express this natural product cluster. It just …

… sometimes. And some of the really early work – it took a long time for .. I mean, structural elucidation was … of those stories percolate through the literature for a long time before researchers reached consensus on structural … gene clusters, and their MS and MS-MS data under a huge range of different acquisition conditions and their raw NMR …

… (CMM): Genomic studies of microbial and plant metabolism reveal biological routes to recover, reuse, and transform …