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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Genome Institute ( https://ror.org/04xm1d337 ) and the Environmental Molecular Sciences Laboratory ( …

… as exploring and exploiting biocatalysts – that is, using enzymes to do chemical reactions. Obviously, in my work, in … flavors. So non-heme enzymes, it just means that they need iron. DAN UDWARY: Right. ALISON NARAYAN: They have iron in … UDWARY: OK. ALISON NARAYAN: I think that there are several barriers to get to that place. So the first is, we don’t the …

… evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both … of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… unless there’s enough of them around to affect their environment. So I think the classical example yeah, is biofilm … metabolomics, which we can then using some tricks to try to identify this particular class of compounds, these acyl … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … (MAGs), and 40,000+ metagenomes along with curated environmental- and other metadata to enable comprehensive …

… cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … Schulz and Horn (2015) Intranuclear bacteria: inside the cellular control center of eukaryotes. Trends in cell …

… will actually chelate any divalent metal. So it could be iron, could be silver, it could be copper, but unless you … that simply believe that we are just not good enough to identify all the functions that this particular microbe with … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … compounds are biosynthesized and their roles in the environment, can unlock new avenues for bio-based products and … genomics, DNA synthesis and metabolomics capabilities to identify, express and characterize bioactive secondary …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … But if they’re not clustered then maybe we’re not really identifying them very well. For sure. But plants certainly … bacteria on the plate as well.  And so cross streak assays is what those would be. The work that we do at larger …