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Publication Policy
… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to … The Microbial Program focuses on using advanced sequencing … Diversification of the microbial product catalog : Beyond minimal draft and improved draft microbial genomes the …
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DNA Synthesis Program
… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    …
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Publications
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Carboxysomal carbonic anhydrases: Structure and role in microbial CO2 fixation
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting … our understanding of plants’ biological and ecological roles to foster sustainable solutions for energy, …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … makeup of microbial communities, shedding light on their roles in various environments and their potential …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … to predict or just understand better the language of microbial cell-cell communication. And he told us about his … “tail of the acyl homoserine lactone” can have different structures, and that is akin to what you’re referring to …
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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government … As a large-scale data generator, the JGI has a key role to play in providing high-quality, structured and curated data to support AI applications. In …
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