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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … are not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often … to improving the resilience and productivity of bioenergy crops. … Development of cell-free based expression …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus …
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Publications
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Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … environmental sustainability, and improving bioenergy crops. … The Metabolomics Program is focused on … can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   Environmental …
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Natural Prodcast Episode 6: Marc Chevrette
… … DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … getting the fungus, but it’s really similar to like human crops like corn. There’s low genetic diversity in the crop. … really interesting – when you can begin to see these guys building better weapons against one another. That gives us …
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Natural Prodcast Episode 16: Marcy Balunas
… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … I think, for the fungus garden and some of the bacterial symbionts. And so of course, the work that we’re doing is …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic … the functional capability of microbial communities based on their metagenome sequence, in the context of …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … resilience. The program’s discoveries support a plant based bioeconomy where plants are a major source of chemical … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE … datasets. [Download PDF] Q3 – Report on new computational approaches for the annotation of genomic data. [Download …
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Natural Prodcast Episode 14: Nigel Mouncey
… in a way. Different formulations. But the breadth of crops, the breadth of countries that we were selling … Yeah, so we put out a strategic plan in 2018. And in building that plan, we thought about secondary metabolites. … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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