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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …

Data produced and released by the US Department of Energy … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … Proposals accepted before FY22 are transitioning away from producing use-restricted data. JGI proposals typically …

To expand access to integrated data, improve tools and … such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to enable … to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …

… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … The DNA Synthesis Program aims to generate large datasets to explore sequence-function relationships, …

… cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable … of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve …

… molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … mass spectrometry-based methods to analyze metabolites from a wide range of biological and environmental samples — … scientists are able to link metabolic activity with gene expression, providing deeper insights into functional …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of … to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative analysis, …

… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial …

… annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial … species specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control …

… you’ll be hearing about microbiology and natural products from the Great Salt Lake, and you’re going to learn, like … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … it was amazing. And now you have– just to the exponential expression of all these genomes and what can happen with all …