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… list available at Google Scholar. Dutkiewicz, Z. et al (2025) “ Proposal of Patescibacterium danicum gen. nov., sp. … genomes with GVClass. ”  npj Viruses, Volume 2 Article 60. …

… found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in finding … Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) DAN UDWARY: Yeah, I think that might be a good example of … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …

… materials. The proposal submission deadline is March 31, 2026 .  … (CMMs). Click for a list of CMMs and the results of the 2023 DOE Critical Materials Assessment . While we expect most … the Molecular Foundry, the project needs to be scoped for 12 months or less. We can help you scope that part of the …

… right? BEN: Yeah, yeah. Well, we are at [10 to the] minus 12 [Molar concentration]- is sufficient to kill cells. So … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain … these natural products. So this gives you approximately a 6% successful drug discovery rate.   And this is 100 times …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … University, was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight …

… in this hypersaline environment, which can range from 8% to 28% salinity. We have toxic metals, so these concentrations … reminds me almost working with Bill back in the ’50s and ’60s of the golden age of antibiotic discoveries. Everything … there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re …

… we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … do you check if they’re there? Like we always talk about 16S for bacteria, but we don’t talk about it so easily with … you look at the ITS region. That’s equivalent to the 16S. However, we did have a talk by Mark Stadler today who …

… [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … development and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of …

… acids (aa) in size, half that of previously known class 2 CRISPR enzymes that are typically 950—1400 aa. They were initially identified by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It … out that some of these were shorter than the typical Cas12d proteins and were also found next to cas1 genes. Further …

… seems hard to believe in retrospect. BILL FENICAL: Well, in 2021, absolutely hard to believe. But when you go way back, … with the National Cancer Institute who had a panel of 60 different cancer cell lines. And we would send them these … using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with everything that’s known. So …