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… welcome back to Natural Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In … talk and that now I can bring it to you. So enjoy, episode 11 of Natural Prodcast. Alison Takemura: Marnix, where are … to tell a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on …

Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): 1045-1054 (2017). Schulz F., Yutin N., Ivanova N. N., … discovery of biomass-degrading genes and genomes from cow rumen. Science 331, 463-7 (2011). Newton I.L., Woyke T …

… laboratory — and rumen microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the … data obtained from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on …

… a bioenergy plant single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled … 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 10.1016/j.celrep.2023.112676 10.1016/j.devcel.2022.01.008 …

Submission Deadline Check back Spring 2026 for the FY27 call Check back Spring 2026 for the FY27 call Sept. 9, 2025 Jan. 29, 2026 Review Date June 2025 …

… there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re trying to do … happening. And so we should have somewhere around 10, 11, 12 million BGCs in the database on the release, and …

Back in 2011, JGI-supported researchers published a paper in the … . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used …

… recruit new talent for biosciences.  Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed … et. al.  2024 . Microbiology Resource Announcements, e00527-24 Draft genome sequences of  Butyrivibrio hungatei  DSM …

… have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at … has discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range, but at … the Proceedings of the National Academy of Sciences (PNAS). Switchgrass, Panicum virgatum , is a widespread, perennial …

… this is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome … reviews of genome mining: Ziemert, Alanjary, and Weber’s 2016 overview of genome mining (open access) The …

Protocol JGI’s Small RNA Sample QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for …