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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … a minority of cultivated bacteria, still persists to date. Research Team    … Phylogenetic diversity estimates show …
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Natural Prodcast Episode 19: Bill Fenical
… of Oceanography in San Diego. Bill is a pioneer of marine natural products, getting into the ocean and looking … you think about the fact that, when plants and animals and microbes evolve, they evolve to make molecules that improve … in huge quantities, 50,000 liter fermenters, to produce a kilogram of a drug, for example. So we saw the option to now …
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Marine Microbe Contains Multitudes
In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But … twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have wondered, how … lead author Dominique Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site …
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Mission
… user facility supported by the Biological and Environmental Research program, the Joint Genome Institute provides … Science Program, characterize organisms (plants and microbes) relevant to the DOE science mission areas of … of organics will not be considered. Projects targeting marine systems must clearly demonstrate relevance and …
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Microbial Program
… techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in energy, … datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in …
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FICUS
Science (FICUS) call represents a unique opportunity for researchers to request the capabilities and expertise of … beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise … resources available from the Advanced Photon Source, and contains useful tips for submitting a successful proposal. … …
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Natural Prodcast Episode 11: Marnix Medema
I wish I could use this tool. I don’t have this kind of research area though, so. Dan Udwary: You can, Alison, … then got funded to work for two years at the Max Planck for marine microbiology in Bremen, Germany. And I wanted to work … a nice example of going from a whole community with many microbes, hundreds of gene clusters, and then being able to …
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Natural Prodcast Episode 15: Katherine Duncan
… wouldn’t it be cool to look at these– it was actually marine invertebrates there– but look at these things in the … what’s important in terms of the chemistry produced by microbes. And by what’s important, I mean, like, where … name, and also extremely well-organized, makes doing research on a person very easy. Kate Duncan: Well, so, I did …
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Publication Policy
JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users … between all systems to maximize the impact of user research. The crucial elements are  proposal Award DOI(s), … Statement in the acknowledgments: “(A portion of) This research was performed under the Facilities Integrating …
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IMG Group
Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is … computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI … Computational Biosciences Group at the Computing Sciences Research Division of LBNL. … Focus Areas … Average …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data … and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Maybe if you could talk about what your– I don’t know– research background pedigree is. I hate to like sort of like … just not enough time and money. I mean, we have a huge marine fungal project in collaboration with Bill Fenical at … of Utah , about her secondary metabolism research on novel microbes and bioactive compounds in the Great Salt Lake. …
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