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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science The humble lichen is a superorganism: one being that is actually … glomerata . To see how gene expression changes when living together versus apart, the team grew the fungus and alga, …
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Accessibility/Section 508 Statement
The U.S. Department of Energy is committed to making its electronic and information technologies …
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Natural Prodcast Episode 11: Marnix Medema
… due to the pandemic. And she’s sleeping in our bedroom together with us still while she’s still four months old. So … come when they want to see you handle a pipet for making a nice video. Alison Takemura: Marnix, It’s just from … antiSMASH. And it’s actually quite a challenge also in making a tool that is not too easy to– for which it’s not …
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FICUS Overview
… with separate review schedules and selection processes, making it difficult to propose projects that truly …
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Natural Prodcast Episode 8: Eric Schmidt
… of Utah. I’ve known Eric for a long time – we worked together on Aflatoxin biosynthesis while he was a postdoc in … way, is to make a protein using the normal cellular way of making proteins, with a ribosome. Then, some other enzymes … them. Is it the animal or part of the microbiome that’s making these compounds? So in the end, we took an approach …
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Natural Prodcast Episode 22: Alison Narayan
… of the structures and also the challenge and thinking about making them. So I really came at it not necessarily based on … take those structures as inspirations to really start making other molecules related to those scaffolds. DAN … yellow, very fun. So in our collaboration with JGI, we put together our wish list of sequences for flavin-dependent …
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Natural Prodcast Episode 6: Marc Chevrette
… also a really good friend of mine. I met him when we worked together at the late great Warp Drive Bio, a biotech startup … research-as-learning course. So they’re in the lab, they’re making discoveries, there is no like, you know, do your … And they’re really excited about the strides that they’re making in terms of stewardship. Now, that’s mostly talking …
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Natural Prodcast Episode 16: Marcy Balunas
… over about a month.  DAN: What are those bacteria making?  MARCY: What are those– they make chemistry! And so … fact, we are interested in how the community itself works together to elicit new metabolite production. And we are … any kind of a platform.  MARCY: That’s interesting. Just making sure that natural products is as inclusive as it can …
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Publication Policy
… of genome browsers, etc. The users, collaborators and JGI together aim to publish the first analysis of data produced …
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The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata
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The More the Merrier: Making the Case for Plant Pan-genomes
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Natural Prodcast Episode 10: A Primer on Genome Mining
… codes for proteins that do the chemistry that put molecules together that become bioactive molecules in some cases, … biosynthesis of a secondary metabolite, those are clustered together in a genome for some reason. So if you could find a … mining, how the biosynthetic gene clusters are clustered together so it can be easy to find the whole pathway. So how …
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