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… metabolism. Hey everybody, this is Dan with episode 13 of National Prodcast. This continues our little section … a bit embarrassed that we recorded this conversation about 10 months ago. I was pretty green at the time and had some … and I hope you’ll enjoy it too. So here we go– episode 13 with Paco Barona-Goméz. DAN UDWARY: Hey Alison. ALISON …

… getting them out to you all. But for now, here is episode 10 of Natural Prodcast, the primer on genome mining. Hey, … APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in finding your … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …

… of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica … al.  2023 . Microbiology Resource Announcements. 2023 12 (10), e00548-23 Whole genome sequence of the denitrifying … Berner, et. al.  2024.  Microbiology Resource Announcements 13 (10), e00517-24 Draft genome sequence of  Nitrobacter …

… in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or pathogens) and as the most … program also explores microeukaryotic members of microbial communities, cataloging gene markers, and producing … biocontrol agents dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to …

… my Peace Corps volunteer stint, and that it was in all the maize. So the main food that you ate was called Papa, which is this maize meal. And he was talking about how all this – … first started out the natural product community was almost 100% bacterial. Only people working in mycotoxins worked …

… in this hypersaline environment, which can range from 8% to 28% salinity. We have toxic metals, so these concentrations … And you have these different types of particulate like 2.5, 10 PPMs and just the size of the particle and how far they … there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re …

… like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed Marnix … community. For us, it’s these methane oxidizing bacterial communities that we like to look through as a lens, and … acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. Publication: Cummings DA …

… activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to … focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions and … This research enables us to better understand how microbial communities contribute to critical processes such as carbon …

… metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a month now since … So they’re in the picomolar range. ALISON: Picomole… is [10 to the] minus twelve, right? BEN: Yeah, yeah. Well, we … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain …

… proposals as well. I’ve been at the JGI for 20 years, and 10 of those years, I’ve been a project manager. MENAKA … amount that they can request. So the minimum request is 100 kb. The maximum request is 500 kb. DAN UDWARY: For DNA … chance of getting approved because you requested only 100 kb versus 500 kb. In the lab, they’re going to do the …