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… technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … thermostable Cas9 with increased lifetime in human plasma.  Nat Commun . 8(1):1424. Sczyrba A, et al. …

To expand access to integrated data, improve tools and infrastructure as well as ensure … will be the development of tools and infrastructure for microbiome data science, and the development of new … to unlock new possibilities in microbiome data science. … National Energy Research Scientific Computing Center … DOE …

Program combines large-scale, time-series metagenomic data with detailed characterization of model systems to … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements … the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative ( NMDC ) to enable …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following … of Composable Elements (ICE) repository and/or DNASU Plasmid Repository) at the end of the embargo period. … During …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific … IF APPLICABLE) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE … Institute (JGI) ( https://ror.org/04xm1d337 ) and the National Energy Research Scientific Computing Center (NERSC) …

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic … a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory ( Berkeley Lab ) and part of the … DOE science mission areas of bioenergy and environmental microbiome processes.  Among the JGI’s largest dedicated …

… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …

… to request the capabilities and expertise of multiple DOE National User Facilities in one research proposal.  … across at least two of the facilities, and generate datasets beyond what each of these facilities could generate … Scattering (Bio-SANS) instrument available at Oak Ridge National Laboratory  Center for Structural Molecular Biology …

… of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for … requirements as other academic lead institutions. OTHER DOE NATIONAL LABORATORIES:  A version of the Bilateral DOE … on proposals submitted by researchers from another DOE National Laboratory, a JGI-BDLUA ,  BDLUA Synthesis Appendix …

… works closely with DOE computational facilities (e.g., the National Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to …