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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and biogeochemistry. This research helps translate their genomic potential into practical applications, including … program’s focus is on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … transferred. Things shift between even different genus. And so often, secondary metabolism genes don’t look …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The program provides high-quality, large-scale genomic data to advance microbial research that drives … management. The program aims to generate high-quality genomic datasets, particularly for uncultivated …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … .  15032 Eloe-Fadrosh EA, et al. (2016) Global metagenomic survey reveals a new bacterial candidate phylum in …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …
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Environmental Genomics Group
… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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A global phylogenomic analysis of the shiitake genus Lentinula
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Partnerships: Adopt-A-Genome
… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated …
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CSP Functional Genomics
The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics …
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