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… by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, … the active version. For researchers with a Howard Hughes Medical Institution (HHMI) appointment, a version of the …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral … our understanding of the impacts of these viruses on microbiome processes is still limited. One key challenge …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … QUAVE: Yeah, so I mean my path towards natural products and medical ethnobotany really began with early childhood … get a DNA sequence first. And there are plenty of software tools to find natural product gene clusters, and even be …

… Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics projects: Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a downloadable …

… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … We compare those sequences with our sequence. The premier tool for that these days, the one that pretty much everybody … little vague to me. What do you mean by putting a bunch of tools in one package? DAN UDWARY: Oh, sure. So if I wanted …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … The Secondary Metabolites Program targets the vast and … support users, our efforts include developing computational tools for predicting biosynthetic gene clusters (BGCs), …

… of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. …

… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion Episode” of Natural … of always working on natural products but just different tools and how to really access and manipulate these pathways … there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re …

… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … challenge our understanding of viral complexity and evolution Our research focuses on discovering and characterizing …

… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research helps translate their … fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to …