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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … fostering a bioeconomy powered by nature’s resources. … The Fungal & Algal Program harnesses cutting-edge sequencing …
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Fungal & Algal Program User Advisory Committee
The Fungal & Algal Program Advisory Committees is chartered by … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panels and advocates of Program strategy, operations, and scientific relevance …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … ‘omics methods. Here we were able to capture both plant and fungal expression patterns in root cross-sections. … …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the … be able to really see how human civilization is destroying biodiversity over the past 80 years! DAN: Maybe! How much …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …
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Products
Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome … sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new … products). … Microbes constitute the largest reservoir of biodiversity and functional versatility on Earth. Their …
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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you should go back and listen to the Nancy …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … partnerships. To learn more about these other plant-fungal relationships, an international team led by graduate …
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