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… Sorghum genome serves as a reference for the highly complex sugarcane genome . The … with two identical sets of chromosomes to produce a monoploid reference sequence. For the highly polyploid … team of researchers has successfully assembled a first monoploid reference sequence using a targeted approach …

… through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and … [QA/QC]), large-scale liquid handling automation, and sequence analysis. … access to cutting-edge cell sorting, DNA amplification, and sequence analysis to recover the genomes of uncultivated …

… When submitting sequences to the JGI DNA Synthesis program, please include … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… Sugarcane was the last major crop without a reference quality genome and now crop researchers can work … enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in … at CIRAD was supported by the International Consortium for Sugarcane Biotechnology. The work at the Institute of …

… pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … For counting: text file of gene counts (mapped against reference transcriptome or de novo assembly), DGE, alignment …

… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… if you ended up here somehow without having listened to the first part, you might be a little lost, and I’d suggest you go back and check the first episode out. This one continues the introductory … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …

… resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal … based on their metagenome sequence, in the context of reference isolate genomes included from the IMG/M system. …

… related production systems.  Invasive plant species; and first-generation biofuel targets (i.e. corn, sugarcane, rapeseed/canola, palm oil). Projects focused on …

… secondary metabolism.  DAN: Hey there, and welcome to the first episode of Natural Prodcast. First, maybe, a little bit of background. My name is Dan … what JGI can do to help that. So here we are. This is the first episode, and at the same time I’m going to release 5 …