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… components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … species specificity of single cells and genomes extracted from metagenomes, and also as a metric for quality control …

The Metagenome Program uses advanced sequencing technologies to … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis …

… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … I’m so excited about my lab’s robot is that it gives us a tool to help us– DAN UDWARY: You can generate that data. …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … We compare those sequences with our sequence. The premier tool for that these days, the one that pretty much everybody …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM …

… bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …

… “Adopt a Genome” is an informal program for faculty to “claim” the … … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of … insights from sequence data, employing IMG data and tools for comparative analysis, visualization and …

… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …

I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … an undergraduate and not succeeding and still using all the tools from mechanistic enzymology to natural product …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … more into the meta genome mining. We started to build the tools for natural product researchers that easily can … we might play on air, email us at JGI-comms, that’s JGI dash C-O-M-M-S @LBL.gov. And because we’re a user facility, …

… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …

… the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …