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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis …
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DNA Synthesis Program
… bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …
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Natural Prodcast Episode 10: A Primer on Genome Mining
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … We compare those sequences with our sequence. The premier tool for that these days, the one that pretty much everybody …
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Microbial Program
… inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …
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Natural Prodcast Episode 11: Marnix Medema
Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM …
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Plant Program
… to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … behind phenotypic evolution. It also utilizes advanced tools, including deep learning algorithms for gene … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …
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Natural Prodcast Episode 22: Alison Narayan
… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … I’m so excited about my lab’s robot is that it gives us a tool to help us– DAN UDWARY: You can generate that data. …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the … … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of … insights from sequence data, employing IMG data and tools for comparative analysis, visualization and …
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Natural Prodcast Episode 12: Nadine Ziemert
… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … more into the meta genome mining. We started to build the tools for natural product researchers that easily can … we might play on air, email us at JGI-comms, that’s JGI dash C-O-M-M-S @LBL.gov. And because we’re a user facility, …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome …
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Fungal & Algal Program
… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to …
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