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With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant …

… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … a lot more than that. The first one I would say is the complexity of the capabilities that we have and that you can … our eukaryotic genomes, all our eukaryotic genomes. Fungal plant, algal genomes, a lot of effort goes into generating …

The CSP Functional Genomics call is to enable users to perform …

… approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon … is no cost to the user and no granting of funds. … For the CSP Large Scale call, a Letter of Intent (LOI) is required … work will NOT be considered under this program. Plant pathogens will only be considered if they are of …

The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

… industry engagement through three primary routes:  … The CSP provides the scientific community at large with access … atmospheric gas mitigation properties of multiple rice plant growth promotion technologies using methanotrophs. … Anuvia Plant Nutrients is partnering with the JGI to help drive …

Plants are complex organisms that harbor a fantastic … contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by … We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial …

Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … to soil carbon storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory …

… target is based on 98% of the total available hours.   FY 2021 DOE Metrics There were 2,180 unique* JGI users in … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …

The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and … e01280-22. 10.1128/msystems.01280-22 Clum, A. et al. (2021)  DOE JGI metagenome workflow …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not … has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven …