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… Menaka Wilhelm, who is the host of JGI’s other podcast, Genome Insider . If you’re a Genome Insider listener, then … going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … today. Mostly, I think it all comes to explaining what a CSP is, how you apply for and get one, and what happens once …

… The CSP Functional Genomics call is to enable users to perform … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable …

… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide …

… For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… and should generally conform to the guidelines for our  CSP Large Scale call .  Process Proposals may be submitted … ethanol and other biofuels, advancing the federal initiative that seeks to reduce U.S. gasoline consumption by … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science (DS), Biological and …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … Roux, S., Paul, B.G., Bagby, S.C. et al. (2021) Ecology and molecular targets of hypermutation in the …

… target is based on 98% of the total available hours.   FY 2021 DOE Metrics There were 2,180 unique* JGI users in FY2021 , which includes Principal Investigators (PIs), Co-PIs, … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …

… Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … CSP Large Scale Proposal #1 … CSP Large-Scale LOI #1 … CSP Large-Scale LOI #2 … CSP New Investigator Submission … CSP Functional Genomics Submission …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other … bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint …