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… going to talk about JGI’s Community Science Program , or CSP, which is the main mechanism by which users work with … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … and a strong research team that has a high chance of success. DAN UDWARY: How do I phrase this? Sorry. [LAUGHTER] …

… See below for examples of successful Letters of Intent to our Community Science … Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … Microbial contributions to soil carbon storage during …

… The CSP New Investigator Call is for investigators and research … PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide … a novel approach or form the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed …

… The CSP Functional Genomics call is to enable users to perform …

… For the CSP Large Scale call, a Letter of Intent (LOI) is required …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … The Microbial Program focuses on using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and …

… target is based on 98% of the total available hours.   FY 2018 DOE Metrics There were 1,882 unique* JGI users in FY2018 , which includes Principal Investigators (PIs), Co-PIs, … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …

… hosts (Nature 2016, Science 2017, Nature Microbiology 2018), discovery of new genes with important … new CRISPR-Cas types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of … data. Science  363(6425):350-352 Harrington LB, et al (2018) Programmed DNA destruction by miniature CRISPR-Cas14 …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …

… about our proposal submission process. You can review successful letters of intent and submissions at the bottom … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release …