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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in … tools for analyzing the functional capability of microbial communities based on their metagenome sequence, in the …
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Environmental Genomics Group
… genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to …
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IMG Group
… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing … Development and maintenance of the Integrated Microbial Genomes (IMG) data management system … As part of …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… really not like anything that’s been identified to date and characterized to date. So we’re one, looking at how unique … that– is toxicity of these heavy metals when they do become airborne and what happens when we breathe these in, … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Community Science Program
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Plant-Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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Micro-Scale Applications Group
Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …
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Natural Prodcast Episode 11: Marnix Medema
IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … just been looking at like 16S taxonomic profiles of these communities looking at who is in there, but never like what … your own computer. MIBiG is a repository of experimentally characterized and manually annotated BGCs. And now BiG-SCAPE …
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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …
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CSP Large Scale Call
… to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, and …
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