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Daily Cycles of Microbial Decomposition

Marine and freshwater microbial communities and activities vary over the course of the day. In contrast, researchers know little about whether these same patterns exist on land. The team aims to profile the activity of surface soil microbes (those on dead leaf litter) of an arid ecosystem over the course of three days. The leaf… [Read More]

Microbes That Impact the Soil Carbon Cycle

This project will identify and characterize the dominant uncultivated microorganisms that mediate major transformations in the soil carbon cycle. The genetic capacity of microbial communities can be studied through genomic approaches but it remains difficult to make direct links between the genetic capacity of microorganisms and their function in the soil carbon cycle. Proposer: Dan… [Read More]

River Microbes and the Carbon Cycle

River microbes play a key role in transforming and metabolizing dissolved organic matter (DOM) and thus have an important impact on global carbon cycles. However, scientists’ understanding of the relationship between the chemical composition of DOM and the genomic functional activity of microbial communities remains limited. Here, researchers aim to produce an extensive metagenomic and… [Read More]

Meet a JGI Postdoc: Estelle Schaefer

From September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? Plant and microbe interactions. I’m setting up… [Read More]

Meet a JGI Postdoc: Adam Session

From September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? I work in the Eukaryote Super Program… [Read More]

Meet a JGI Postdoc: Kateryna Zhalnina

From September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? I study how plants use their exudation… [Read More]

Meet a JGI Postdoc: Hiroshi Otani

From September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? The products of microbial metabolism have biotechnological… [Read More]

Meet a JGI Postdoc: Jess Jarett

From September 18-22, 2017, we introduce you to 5 postdocs at the JGI in honor of National Postdoc Appreciation Week, which recognizes the contributions of these early career researchers. Through a series of hard-hitting questions, we find out what drives each one.   What do you work on? I work on the Microbial Dark Matter… [Read More]

National Microbiome Data Collaborative Now on Trellis

“At the dawn of the third decade of microbial genomics, and well into the information age, the establishment of a national microbiome data center can pave the way to understanding the Earth’s microbiome.” –Nikos Kyrpides Following the June 2017 ASM Microbe Town Hall on “Envisioning a National Microbiome Data Collaborative,” everyone interested is encouraged to… [Read More]

Nikos Kyrpides Named 2018 ASM USFCC/J. Roger Porter Awardee

Congratulations to Nikos Kyrpides, JGI’s Prokaryote Super Program head, who was recently selected as the 2018 USFCC/J. Roger Porter Award recipient by the American Society for Microbiology (ASM). This award recognizes outstanding efforts by a scientist who has demonstrated the importance of microbial biodiversity through sustained curatorial or stewardship activities for a major resource by… [Read More]