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Natural Prodcast Episode 10: A Primer on Genome Mining
… in most fungi, biosynthetic gene clusters, which are the genes that do the biosynthesis of a secondary metabolite, … oxidative conversions and do some really complicated carbon skeleton rearrangements, chemistry that we probably … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …
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Fungal & Algal Program
… rich diversity of fungi and algae. These organisms play a critical role in ecological processes such as carbon … or pathogens) and as the most efficient degraders of plant biomass. These abilities are crucial for sustainable plant … team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a collection of fungal genes …
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Mission
… optimize our service to the community through responsibly managing our people and resources. Our vision is to lead … to produce biofuels, bioproducts, biomaterials, and, critical minerals and materials. Understand the assembly, … strains, or enzymes to convert plant biomass components into fuels, chemicals, and bioproducts, …
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Natural Prodcast Episode 12: Nadine Ziemert
… of secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with … Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And … really seeing that. And I’m always just looking from the genes and pathways and what’s happening there. And he really …
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Frequently Asked Questions: Project Management
… the portal search page and then clicking the blue “reports” button on the right side. The Project Overview report … following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   …
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Plant Program
… global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, … climate and soil conditions around the globe to identify genes to improve our domesticated species.  The program … researchers use as a model for grasses used to produce biomass, food, feed and forage because it is well-suited to …
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Project Management Office
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Microbial Program
… cycling and inter-organismal interactions, which are critical for advancing sustainable solutions in agriculture, … from isolates and single cells. This effort uncovers novel genes, protein families, and pathways, enhancing our … isolated from environmental samples.  … The IMG/M system serves as a community resource for comparative analysis and …
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Natural Prodcast Episode 7: Ben Shen
… compounds, Alison. They are – if you can imagine – two carbons in a triple bond attached to two carbons in a double … right? BEN: Yeah, yeah. Well, we are at [10 to the] minus 12 [Molar concentration]- is sufficient to kill cells. So … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain …
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Natural Prodcast Episode 18: A CSP Primer
RNA alongside. That really helps us to determine where genes start and end and really help improve our annotation. … the link on where to submit your proposal, click this button, and that’s a start point. And also on the website, … make sure that this data set is not just one data set that serves the PI, and PI writes one paper and that’s it, and …
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Natural Prodcast Episode 14: Nigel Mouncey
… never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … takes about 10 years. Costs are in the range of $100 to $120 million to do that.  DAN: OK. So about the same amount … team who have been really looking at ways to express genes in organisms that haven’t been used for really any …
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Natural Prodcast Episode 2: The Primer, Part 2
It’s an evolution of primary metabolism. So a lot of the genes and the DNA that’s used for secondary metabolism, they … somewhat similar group of organisms that I think are critically important to understanding the field of natural … But these are these are almost like, you know, like a mushroom or something that’s actually organized in the way …
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