Search

… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … driving virus:host dynamics in environmental microbial communities. This involves both experimental and …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to … principles that govern ecosystem processes. This research provides insights into microbial diversity and …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust … through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, … [QA/QC]), large-scale liquid handling automation, and sequence analysis. …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The Environmental … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of …

… Our research is focused on the discovery and characterization of … bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … of giant viruses, which challenge our understanding of viral complexity and evolution Our research focuses on …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …

… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … the DOE aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The …

… Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today we’re going to talk to Kate Duncan. And Kate is– I should ask, you … Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …