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The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …

The IMG group owns and maintains integral components of JGI’s production workflow, and is … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … JGI consists of around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, …