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… does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … I think, for the fungus garden and some of the bacterial symbionts. And so of course, the work that we’re doing is …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … 356 (6333), 82-85 Schulz et al. (2016) A Rickettsiales symbiont of amoebae with ancient features. Environmental …

… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … biological inference. … Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … The team works hand in hand with the Project Management Office to help ensure the JGI’s genomic capabilities are …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … for sustainable growth of biofuel feedstock and fungi, as symbionts, pathogens, and biocontrol agents dramatically … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … & Cavanaugh C.M. The Calyptogena magnifica chemoautotrophic symbiont genome. Science 315, 998-1000 (2007). Woyke T ., …

See below for examples of successful Letters of Intent to our Community … storage during simulated range shifts of plant-fungal symbionts … Elucidation of the gene regulatory networks …

… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … and in some cases of really extremely small genomes, like symbionts that can’t live without their host. They have no …

Below is a brief description of the process needed to prepare and … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … in very highly coevolved systems where a microbe becomes a symbiont, for example, of an ant. So these are very stable … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …