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When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … in length, cloned into vector of choice Glycerol stock of sequence verified clone 170/NA DNA Synthesis Constructs …

… pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is … by accessing various reports on the JGI Portal . Use the search feature to bring up a list of projects that you are …

Microbial communities living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science … that emit hot, mineral-rich water. These vents are too deep in the sea to get any sunlight, and yet they still …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … especially for these primer episodes, if you want to dive deeper on all this at http://naturalprodcast.com . And then … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very … natural products or biosynthetic chemistry and want to dive deep on the topic, or just want to take a look at several …

… there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … again? DAN UDWARY: I was just asking if the Scripps research … NADINE ZIEMERT: Oh, yeah, Scripps. Yeah. DAN … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC:  Sure. … peptides”. And, you know, we don’t need to get too deep into the chemistry but let’s talk about that compound … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …

National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative Genomics …

… thrive, and even support entire ecosystems. Hear from researchers Anna-Louise Reysenbach, Emily St. John, Gilberto …

… by those generating data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for … Director’s Science (DS), Biological and Environmental Research Support Science (BERSS), or Bioenergy Research … embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly …