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University of California, Merced Internship Program
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Natural Prodcast Episode 10: A Primer on Genome Mining
… talk about what it is, hear me make a pained analogy to the California gold rush. And we’ll talk about a new JGI paper … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …
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Sequencing Technologies
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Who We Are
… staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science …
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Institutional User Agreements
… responsibility for all material transfers. *University of California Campus : An Appendix for the synthesis proposal …
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Natural Prodcast Episode 5: Brad Moore
… then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against … with Brad Moore, a researcher from University of California (UC), San Diego and Scripps Institution of …
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Products
… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … in length, cloned into vector of choice Glycerol stock of sequence verified clone 170/NA DNA Synthesis Constructs …
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Mission
… of the Berkeley Lab campus, atop the hills above Berkeley, California and operated by the University of California for … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … basis of their behavior in the environment.  The JGI genome sequences and metabolomes of microbes and microbial …
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How to Submit Sequencing Samples
… pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …
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Natural Prodcast Episode 19: Bill Fenical
… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … excited about chemistry. But at some point in time, being a Californian, I looked out and saw the ocean and thought to … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … of those effects and how that compares to Owens Lake in California and what happened there and just trying to see … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …
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