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… mechanisms that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. … algae, examining both natural populations and engineered strains. This approach allows for the identification of key … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … DOE's missions. … The DNA Synthesis Program plays a central role in advancing functional genomics, focusing on … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … sequencing projects, including 10,000 Actinomycetota strains and 10,000 type strains. These efforts will provide … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and … expression and functional exploration.  The developed strains represent an additional phase of user-accessible …

… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … U.S. Culture Collection Network (USCCN) to nominate their strains for sequencing, as long as they have a scientific …

When submitting sequences to the JGI DNA Synthesis program, please include the … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … and fungal metabolism necessary to design communities, new strains, or enzymes to convert plant biomass components into … United States is one of the world’s largest consumers of petroleum, most of which is used for transportation and …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …

… potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … understanding those broader environmental and ecological roles for secondary metabolites is what our mission is. … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … have enabled reconstruction of complete or near-complete population genomes directly from the environment. These … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …