Search

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …

… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , JGI User …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … genomes and particle sizes that rival those of cellular organisms. Giant viruses challenge the traditional …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … environment. And so we know that lots of different types of organisms make lots of different types of molecules, not … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological …

… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … fungi, algae and plants. These compounds are key to organisms' interactions with their environments and with …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric … microbes, microbial communities, and other relevant organisms. We provide access to large-scale datasets and …

… enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … is a lot of literature around enzymes from thermophilic organisms where their peak activity is at an elevated …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … genomic datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and …