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… we have our conversation with Professor Alison Narayan, from the University of Michigan. I hope she’ll accept this … enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …

… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … discovery of biomass-degrading genes and genomes from cow rumen. Science 331, 463-7 (2011). Newton I.L., Woyke T …

… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … At the end of the day, all the content produced by microbes the result of millions of years of evolution. And … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

The genes are pretty much 100% identical. We don't know why one is expressed over the other. As far as whether we're … usually serve as dimers, and then they will bind to certain sequences of DNA. And when they bind to those certain … fun that we've started that is a different subject is from microbes to medicine labs. So this is-- we've been working …

QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage (from PacBio) Best practices for High Molecular Weight DNA … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

Oh, the magical world of the cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the … Since one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of … of rumen-digested switchgrass, researchers isolated and sequenced DNA from rumen microbes involved in the digestion …

… we really recognize, right?  ALISON: And I tend to think of microbes as being able to secrete a lot more things than … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …

… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a … of Utah , about her secondary metabolism research on novel microbes and bioactive compounds in the Great Salt Lake. …

… product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… systems. No one was, at that time, really working with microbes from the ocean. So I felt there was a wonderful … then genomics happened. Dan: Yeah, I did my first genome sequence with you. Brad: That’s right,  Dan: JGI did it in … working with you, Dan, on this one, and we said, “Well, why don’t we have you know, the bioinformaticians go against …