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The JGI’s Microbial Program focuses on using cutting-edge sequencing, … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …

… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … of microorganisms from Great Salt Lake, which is a hypersaline terminal lake about 30 minutes away from campus. … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …

… pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered surprises, adopted … new technologies, and made a few discoveries about the microbial mat denizens.  …

… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that … National Laboratory, used single-cell sequencing to sequence both a cell’s genome and detect accompanying viral …

… exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … systems can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   …