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… The Fungal & Algal Program explores the vast diversity of fungi … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a critical role in …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …

… The Synthetic Biology lab is divided into a DNA synthesis production group … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … We focus our efforts on integrating database mining and sequence design with scaling the production of large, …

… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain … tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination …

… When submitting sequences to the JGI DNA Synthesis program, please include … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, … [QA/QC]), large-scale liquid handling automation, and sequence analysis. …

… The Fungal & Algal Program Advisory Committee is chartered by … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panel and advocates of Program strategy, operations, and scientific relevance …

… capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … applications.  The team has three subgroups: Synthetic Biology Lab : a user science group dedicated to user project … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …

… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data …

… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …