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The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, … environmental mission objectives. Fungi, algae, bacteria, archaea, viruses, and microbial communities of interest to …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

Biology is currently experiencing a revolution brought on by rapid developments in … the sequencing and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene … The GEM catalog expands the bacterial and archaeal orders as seen on the phylogenetic tree, with new …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

Research in the Woyke laboratory focuses on the utility of … the gap between cultivated and uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …

… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … the ocean. We didn’t know whether to study bacteria, fungi, archaea, the whole range of microbial life. So, we just … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … genomics to better understand the plant-associated terrestrial world. Research Team    … Plant microbiomes hold …