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The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in … work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

Below are a list of webinars that can help you through the submission process by … and resources available for your project. Watch all the webinars here . You can find additional webinars covering how to use our data portals here.  … … …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene … to drive innovations that align with DOE's missions. … The DNA Synthesis Program plays a central role in advancing …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation … capability of microbial communities based on their metagenome sequence, in the context of reference isolate …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence … are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… and biogeochemistry. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs and draw from the …

… facilities, who consider technical feasibility and readiness to begin work. During scientific peer review, … in rank order by the reviewers. The ranked proposal list, along with a recommendation from management at the JGI and … Mass Spectrometry, NanoSIMS, and other techniques. … APS webinar … EcoFAB webinar … JGI and EMSL resources webinar … …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … (USCCN) to nominate their strains for sequencing, as long as they have a scientific question that is relevant to … the refining of new technology (e.g., single-cell genomics; metagenomics, etc.).   The faculty-level scientist must be …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address … other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable solutions to … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in …

Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to identify, … We have developed Regulon Identification by in vitro-sequencing (RIViT-seq) to identify RNA polymerase-sigma … expanded the sigma factor-target pairs twofold. We are also utilizing DNA-Affinity Purification (DAP) sequencing to …

The Fungal & Algal Program explores the vast diversity of fungi and algae to … environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic analysis to …

… any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for …  The recent updates were approved by the DOE to address the DNA Synthesis program. When fully executed, the new User … in place before work starts will prevent delays when JGI is ready to send the constructs. The MTA requires signatures by …